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DRX044672: Ion Torrent PGM sequencing of SAMD00043582
1 ION_TORRENT (Ion Torrent PGM) run: 1.2M spots, 198.6M bases, 439Mb downloads

Submitted by: Japan Agency for Marine-Earth Science and Technology (JAMSTEC)
Study: Genome analysis of the deeply branching hydrogenotrophic bacterim Thermosulfidibacter takaii
show Abstracthide Abstract
T. takaii is a deeply branching thermophilic bacteria, but SSU rRNA gene phylogenetic analysis was not sufficient to determine its phylogenetic relationship to other deeply branching bacterial phyla such as Aquificales and Thermodesulfobacteria. In order to clarify the early evolution of the bacterial phyla, the genome project was started. In addition, genome information about its chemolithoautotrophy will also contribute environmental microbial ecology in hydrothermal environments
Sample: mRNA extracted from the cells cultivated with acetate
SAMD00043582 • DRS022000 • All experiments • All runs
Library:
Name: TST_Ace
Instrument: Ion Torrent PGM
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM
Layout: SINGLE
Construction protocol: Ion Total RNA-Seq Kit v2
Spot descriptor:
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Runs: 1 run, 1.2M spots, 198.6M bases, 439Mb
Run# of Spots# of BasesSizePublished
DRR0496291,221,591198.6M439Mb2015-12-01

ID:
2058962

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